# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "zooper" in publications use:'
type: software
license: GPL-3.0-only
title: 'zooper: Download and Integrate Zooplankton Datasets from the Upper San Francisco
  Estuary'
version: 2.5.0.9000
doi: 10.5281/zenodo.3776867
identifiers:
- type: doi
  value: 10.32614/CRAN.package.zooper
abstract: This package downloads and integrates zooplankton datasets from the Sacramento
  San Joaquin Delta. Datasets are manipulated into a consistent format and bound together,
  then differences in taxonomic resolution among datasets are resolved using one of
  two methods, depending on whether the user wishes to analyze community or taxa-specific
  trends. Ancillary environmental data are retained in the final dataset. Users can
  also filter the dataset by a number of parameters.
authors:
- family-names: Bashevkin
  given-names: Samuel M
  email: sam.bashevkin@waterboards.ca.gov
  orcid: https://orcid.org/0000-0001-7406-7089
- family-names: Hartman
  given-names: Rosemary
  email: Rosemary.Hartman@water.ca.gov
  orcid: https://orcid.org/0000-0002-0642-183X
- family-names: Alstad
  given-names: Karrin
  email: Karrin.Alstad@wildlife.ca.gov
- family-names: Pien
  given-names: Catarina
  email: cpien@usbr.gov
  orcid: https://orcid.org/0000-0003-4427-6300
preferred-citation:
  type: article
  title: 'zooper: an R package to download and integrate zooplankton datasets from
    the Upper San Francisco Estuary'
  authors:
  - family-names: Bashevkin
    given-names: Samuel M
    email: sam.bashevkin@waterboards.ca.gov
    orcid: https://orcid.org/0000-0001-7406-7089
  - family-names: Hartman
    given-names: Rosemary
    email: Rosemary.Hartman@water.ca.gov
    orcid: https://orcid.org/0000-0002-0642-183X
  - family-names: Alstad
    given-names: Karrin
    email: Karrin.Alstad@wildlife.ca.gov
  - family-names: Pien
    given-names: Catarina
    email: cpien@usbr.gov
    orcid: https://orcid.org/0000-0003-4427-6300
  journal: Zenodo
  year: '2023'
  url: https://doi.org/10.5281/zenodo.3776867
  doi: 10.5281/zenodo.3776867
repository: https://sbashevkin.r-universe.dev
repository-code: https://github.com/InteragencyEcologicalProgram/zooper
commit: df83c6182f35e2d3a7dd03c9f1ca5eb0d99c59fa
url: https://github.com/InteragencyEcologicalProgram/zooper
date-released: '2019-12-13'
contact:
- family-names: Bashevkin
  given-names: Samuel M
  email: sam.bashevkin@waterboards.ca.gov
  orcid: https://orcid.org/0000-0001-7406-7089
references:
- type: article
  title: 'Interagency Ecological Program: Zooplankton abundance in the Upper San Francisco
    Estuary from 1972-2021, an integration of 7 long-term monitoring programs'
  authors:
  - family-names: Bashevkin
    given-names: Samuel M
    email: sam.bashevkin@deltacouncil.ca.gov
    orcid: https://orcid.org/0000-0001-7406-7089
  - family-names: Hartman
    given-names: Rosemary
    orcid: https://orcid.org/0000-0002-0642-183X
  - family-names: Thomas
    given-names: Madison
  - family-names: Barros
    given-names: Arthur
  - family-names: Burdi
    given-names: Christina E
  - family-names: Hennessy
    given-names: April
  - family-names: Tempel
    given-names: Trishelle
  - family-names: Kayfetz
    given-names: Karen
  - family-names: Alstad
    given-names: Karrin
  - family-names: Pien
    given-names: Catarina
  journal: Environmental Data Initiative
  year: '2023'
  url: https://portal.edirepository.org/nis/mapbrowse?scope=edi&identifier=539
  doi: 10.6073/pasta/8b646dfbeb625e308212a39f1e46f69b
- type: article
  title: Five decades (1972–2020) of zooplankton monitoring in the upper San Francisco
    Estuary
  authors:
  - family-names: Bashevkin
    given-names: Samuel M
    email: sam.bashevkin@deltacouncil.ca.gov
    orcid: https://orcid.org/0000-0001-7406-7089
  - family-names: Hartman
    given-names: Rosemary
    orcid: https://orcid.org/0000-0002-0642-183X
  - family-names: Thomas
    given-names: Madison
  - family-names: Barros
    given-names: Arthur
  - family-names: Burdi
    given-names: Christina E
  - family-names: Hennessy
    given-names: April
  - family-names: Tempel
    given-names: Trishelle
  - family-names: Kayfetz
    given-names: Karen
  journal: PLOS ONE
  year: '2022'
  url: https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0265402
  doi: 10.1371/journal.pone.0265402